Militias aren’t government controlled. That’s the whole damn point. You regulate them if they’re doing dangerous stuff like practicing next to a school, but you can’t do things that are effectively preventing them from existing.
For your questions on hunters and ownership and whatever, there’s a difference between constitutionally protected and legal. States can say hunting with guns of various types (you’ll note there are restrictions). You don’t need the constitution to make something legal and it not being constitutionally protected doesn’t make it illegal. States can legalize or restrict firearms for anything that does not prevent the citizenry from forming a well-regulated militia. Having your guns locked up and disassembled when not in use in training doesn’t prevent you from forming an effective(-ish) militia so DC vs. Heller was badly decided (5-4! it was a contentious decision split along political lines).
All the other weapons are arms too and if owned for the purpose of militia service, should be legal. If not, states can decide which weapons are appropriate for which purposes. Texas can decide cowboys were super cool and everyone should have a mandatory six shooter while peaceful Hawaii can decide guns are good for hunting pigs and bad for going to the beach. And if we decide we want to change one or the other, that’s our business, because the government can regulate things that don’t involve preventing the citizenry from rising up against it.