i don’t see how it’s shooting yourself in the foot. one of the ideas behind the argument i linked to is that pitting god against science isn’t good theology. science will offer more compelling explanations for material phenomena, but that doesn’t necessarily exclude the existence of a god. the idea is to see god as more of an architect: something that made a world that has all these wonderful scientific rules and complex systems that we can discover.
i should mention that i’m not a religious person but i do think it’s an interesting thing to think about.